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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845477.1_cds_XP_016509356.1_22296
CDS Infomation

[gene=LOC107826838] [db_xref=GeneID:107826838] [protein=UDP-N-acetylmuramate--L-alanine ligase-like] [protein_id=XP_016509356.1] [location=complement(join(5553..5611,5791..5869,6227..6322,6429..6498,6577..6827,8817..8891,11063..11228,11692..11768,11859..11954,12096..12146,12347..12435,13430..13500,13592..13767))] [gbkey=CDS]
Sequence

ATGTGGAATAATGCCATGGGCGCATTGCGAGAAGCCGGTGCCAGAGTGTATATAGGCCAT
TCTGAGCTTAATTTGAGAAAGCATAATGATTCGATGCCTGATGCCCTTGTTGTGTCAAGC
GCGATTTGTGGAGACAATGTGGAGATTTTATATGCCGAGTCTGTTGGAATACCTGTGTAC
AAGCGAGGAGCTTGGTTGGGCAGGATCACTGAAAGCTACAACCTCATTGCTGTCGGTGGA
AGCCATGGGAAGAGTACCACATCTAGTATGCTTGCTTATGTCTTACACGCGATGGGGAAT
GATCTTACAGCTGTAATTGGGGCTTGGGTACCACAGCTTGCTGAAAGAAACATCATCTGT
GGAACTGGTGGCAACTTTGTATTGGAGGCTGATGAGTATGACTGTTGCTTCCTTGGAGTA
ACACCACAGATAGCTGTGGTAACAAATATAGATTGGGAACATGTAGACATTTTTCAAGAT
GTGGAAGCAGTTAAAACTATTTTCCAGAAGTTCATAGGGCAGATAAAGGTTGGAGGACAT
TTAATTTTATGTGGTGATAGTCTAGGTGCGTGCTCTTTGGTCAACAAAATGGGCTCAGAC
TCTGGTGCTAGTTCAGTTCTTCGCAATGATGCATTCCAGATTTCAACTTACGGAATTTCT
AGTTGTAACGATTGGCATCCCTTATCAATATCCCCAAACTCTTGTGGCGGTACCGACTAT
AAGCTGTTTCACAAGGGGCATCATATTGCGGACATCAGCCTACAAATTCCTGGAGTCCAC
AATGTTCTTAATTCATTAGCAGTCATTGCAACTATCCATGCTCTTTTTGCGGATCAGAAA
AAATTTCTTAGTTCCATGGCTTCTTTGCAGCTTCACTTGCAAAAATTTGAAGGTGTTTCC
AGACGTTTTGAGAAGATAGGTATTGTACGCGGGTGCCATATTTACGATGACTACGCTCAC
CATCCCACCGAGATTCAAGCCGTTCTTCAGGCAGCACGCCAGAGATTTCCATTTCAAGAA
CTTATAGTAGTATTTCAGCCTCATACTTACAGTCGCCTAGCAGCATTGAAAGATGACTTT
GCTACTGCATTCACTAATGCGAATAGGGTTATGATTACAGAGATTTATGCAGCTAGAGAA
AGAAATCTTTGGAAGATCAGTGGAAGCGATCTTGCAATGTCTGTAGTTGGCCCGCCATCT
GAGTTTATCCCTTCCCTGATACAAGTGCTGGAAATGCTGGTTGATCAGATATCCAAGGAT
CCCGATCATGAAACTGTCATCTTGACCTTAGGGGCAGGAGACATAACTGCGGTGGGTCAT
AAACTACTACTTGATTTGCAGCAGAGATTACTATAA

Peptide Sequence

PEP ID

XP_016509356.1
PEP Infomation

PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Nicotiana tabacum]
Sequence

MWNNAMGALREAGARVYIGHSELNLRKHNDSMPDALVVSSAICGDNVEILYAESVGIPVY
KRGAWLGRITESYNLIAVGGSHGKSTTSSMLAYVLHAMGNDLTAVIGAWVPQLAERNIIC
GTGGNFVLEADEYDCCFLGVTPQIAVVTNIDWEHVDIFQDVEAVKTIFQKFIGQIKVGGH
LILCGDSLGACSLVNKMGSDSGASSVLRNDAFQISTYGISSCNDWHPLSISPNSCGGTDY
KLFHKGHHIADISLQIPGVHNVLNSLAVIATIHALFADQKKFLSSMASLQLHLQKFEGVS
RRFEKIGIVRGCHIYDDYAHHPTEIQAVLQAARQRFPFQELIVVFQPHTYSRLAALKDDF
ATAFTNANRVMITEIYAARERNLWKISGSDLAMSVVGPPSEFIPSLIQVLEMLVDQISKD
PDHETVILTLGAGDITAVGHKLLLDLQQRLL

Transcript Sequence

Gene sequence data has not been registered.